Integrations

Connect everything. Automate the rest.

PureLIMS integrates with your instruments, ERPs, healthcare systems, and any data source through pre-built connectors, standards-based protocols, and a fully documented API.

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Agilent
Waters
Shimadzu
Thermo Fisher
PerkinElmer
SAP
Sage
QuickBooks
OpenTelemetry
HL7 FHIR

Instrument Connectors

Pre-built connectors for major instrument vendors — Agilent, Waters, Shimadzu, Thermo Fisher, PerkinElmer — with configurable data mapping, submission queues, and automatic retries.

  • Pre-built connectors for major vendors
  • Configurable field mapping per instrument model
  • Submission queues with automatic retry logic
  • Reconciliation dashboard for data integrity
  • Calibration log integration
  • Real-time instrument status monitoring
Instrument Connectors
PureLIMS Module
1
Pre-built connectors for major vendors
2
Configurable field mapping per instrument model
3
Submission queues with automatic retry logic
4
Reconciliation dashboard for data integrity

ERP & Accounting Sync

Bi-directional sync with SAP, Sage, QuickBooks, and other ERPs. Invoicing, inventory, and purchase orders flow automatically between systems with full reconciliation.

  • SAP, Sage, and QuickBooks connectors
  • Bi-directional data sync with conflict resolution
  • Automated invoice generation on report release
  • Inventory level sync and reorder triggers
  • Purchase order management integration
  • Reconciliation reports and error triage
ERP & Accounting Sync
PureLIMS Module
1
SAP, Sage, and QuickBooks connectors
2
Bi-directional data sync with conflict resolution
3
Automated invoice generation on report release
4
Inventory level sync and reorder triggers

HL7 FHIR & Healthcare Standards

Standards-based integration with healthcare systems via HL7 FHIR and HL7 v2 messaging. Share lab results with EHRs, public health systems, and clinical decision support tools.

  • HL7 FHIR R4 resource support
  • HL7 v2 message parsing and generation
  • FHIR DiagnosticReport and Observation resources
  • EHR integration for clinical lab results
  • Public health reporting automation
  • Configurable message routing and transformation
HL7 FHIR & Healthcare Standards
PureLIMS Module
1
HL7 FHIR R4 resource support
2
HL7 v2 message parsing and generation
3
FHIR DiagnosticReport and Observation resources
4
EHR integration for clinical lab results

Data Ingestion Engine

Ingest data from any source — CSV, Excel, XML, JSON, or direct API calls. The ingestion layer handles field mapping, validation, normalization, and error logging before committing to the database.

  • Multi-format import: CSV, Excel, XML, JSON
  • Configurable field mapping with templates
  • Data validation and normalization rules
  • Error logging with row-level detail
  • Scheduled imports and real-time streaming
  • Import history with rollback capability
Data Ingestion Engine
PureLIMS Module
1
Multi-format import: CSV, Excel, XML, JSON
2
Configurable field mapping with templates
3
Data validation and normalization rules
4
Error logging with row-level detail

API-First Architecture

Every PureLIMS capability is exposed through RESTful and GraphQL APIs. Build custom integrations, connect third-party tools, or extend the platform with your own microservices.

  • RESTful API with full CRUD operations
  • GraphQL API for flexible data queries
  • OAuth 2.0 and API key authentication
  • Rate limiting and usage monitoring
  • Webhook support for event-driven integration
  • Interactive API documentation with examples
API-First Architecture
PureLIMS Module
1
RESTful API with full CRUD operations
2
GraphQL API for flexible data queries
3
OAuth 2.0 and API key authentication
4
Rate limiting and usage monitoring

Connector Framework

Build custom connectors using the PureLIMS connector SDK. Define data mapping, authentication, scheduling, and error handling — then deploy alongside built-in connectors.

  • Connector SDK with TypeScript support
  • Declarative data mapping configuration
  • Built-in authentication handler library
  • Scheduled and event-triggered execution
  • Error handling with configurable retry policies
  • Connector marketplace for community sharing
Connector Framework
PureLIMS Module
1
Connector SDK with TypeScript support
2
Declarative data mapping configuration
3
Built-in authentication handler library
4
Scheduled and event-triggered execution

See integrations in action

Walk through instrument connections, ERP sync, and the API with one of our integration specialists.

Schedule a Demo